COMPLECS: Code Migration 05/28/26

COMPLECS: Code Migration

When: Thursday, May 28, 2026
Time: 11:00 a.m. – 12:30 p.m. (Pacific Time)
Location: Zoom details will be provided upon registration
This session offers a 1-hour instruction followed by a 30-minute Q&A.

We will cover typical approaches to moving your computations to HPC resources: using applications/software packages already available on the system through Linux environment modules; compiling code from source with information on compilers, libraries, and optimization flags to use, setting up Python and R environments, using conda-based environments, managing workflows, and using containerized solutions via Singularity. The session covers general principles, with hands-on activities on SDSC resources.

Instructor Biography:

Yuwu Chen, Ph.D., Computational & Data Science Research Specialist, SDSC
Yuwu Chen received his PhD from Louisiana State University in chemical engineering with an emphasis on molecular dynamics simulation of proteins. Yuwu’s key responsibility is to provide a high degree of HPC customer support and professionalism to the research communities of UCSD and other institutions. He is a Singularity user and has provided Singularity user support for HPC users since 2019.

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COMPLECS (COMPrehensive Learning for end-users to Effectively Utilize CyberinfraStructure) training covers the non-programming skills needed to use supercomputers effectively. Topics include parallel computing concepts, Linux tools and bash scripting, security, batch computing, how to get help, data management, and interactive computing. COMPLECS is supported by NSF award 2320934.

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